Publications

  1. Roell K, Koval LE, Boyles R, Patlewicz G, Ring C, Rider CV, Ward-Caviness C, Reif DM, Jaspers I, Fry RC, Rager JE. Development of the InTelligence And Machine LEarning (TAME) Toolkit for Introductory Data Science, Chemical-Biological Analyses, Predictive Modeling, and Database Mining for Environmental Health Research. Front Toxicol. 2022 Jun 22;4:893924. doi: 10.3389/ftox.2022.893924. PMID: 35812168; PMCID: PMC9257219.16;167:107419. doi: 10.1016/j.envint.2022.107419. Epub ahead of print. PMID: 35863239.
  2. Starnes HM, Rock KD, Jackson TW, Belcher SM. A Critical Review and Meta-Analysis of Impacts of Per- and Polyfluorinated Substances on the Brain and Behavior. Front Toxicol. 2022 Apr 11;4:881584. doi: 10.3389/ftox.2022.881584. PMID: 35480070
  3. Truong L, Rericha Y, Thunga P, Marvel S, Wallis D, Simonich MT, Field JA, Cao D, Reif DM, Tanguay RL. Systematic developmental toxicity assessment of a structurally diverse library of PFAS in zebrafish. J Hazard Mater. 2022 Mar 2;431:128615. doi: 10.1016/j.jhazmat.2022.128615. Epub ahead of print. PMID: 35263707
  4. Bilbao A, Gibbons BC, Stow SM, Kyle JE, Bloodsworth KJ, Payne SH, Smith RD, Ibrahim YM, Baker ES, Fjeldsted JC. A preprocessing tool for enhanced ion mobility-mass spectrometry-based omics workflows. J Proteome Res. 2021 August 12.
  5. Butler KE, Takinami Y, Rainczuk A, Baker ES, Roberts BR. Utilizing ion mobility-mass spectrometry to investigate the unfolding pathway of cu/zn superoxide dismutase. Front Chem. 2021 February 09; 9: 614595. PMCID: PMC7900566.
  6. Dodds JN, Alexander NLM, Kirkwood KI, Foster MR, Hopkins ZR, Knappe DRU, Baker ES. From pesticides to per- and polyfluoroalkyl substances: An evaluation of recent targeted and untargeted mass spectrometry methods for xenobiotics. Anal Chem. 2021 January 12; 93(1): 641-656. PMCID: PMC7855838.
  7. Enders JR, O’Neill GM, Whitten JL, Muddiman DC. Understanding the electrospray ionization response factors of per- and poly-fluoroalkyl substances (PFAS). Anal Bioanal Chem. 2021 July 21.
  8. Gilchrist PO, Alexander AB, Green AJ, Sanders FE, Hooker AQ, Reif DM. Development of a pandemic awareness STEM outreach curriculum: Utilizing a computational thinking taxonomy framework. . Education Sciences. 2021; 11(3): 109. PMCID: PMC8612627
  9. Jackson TW, Scheibly CM, Polera ME, Belcher SM. Rapid characterization of human serum albumin binding for per- and polyfluoroalkyl substances using differential scanning fluorimetry. Environ Sci Technol. 2021 September 21; 55(18): 12291-12301.
  10. Marvel SW, House JS, Wheeler M, Song K, Zhou YH, Wright FA, Chiu WA, Rusyn I, Motsinger-Reif A, Reif DM. The COVID-19 pandemic vulnerability index (PVI) dashboard: Monitoring county-level vulnerability using visualization, statistical modeling, and machine learning. Environ Health Perspect. 2021 January 01; 129(1): 17701. PMCID: PMC7785295.
  11. Odenkirk MT, Reif DM, Baker ES. Multiomic big data analysis challenges: Increasing confidence in the interpretation of artificial intelligence assessments. Anal Chem. 2021 May 24. PMCID: PMC8465926.
  12. Wallis DJ, Truong L, La Du J, Tanguay RL, Reif DM. Uncovering evidence for endocrine-disrupting chemicals that elicit differential susceptibility through gene-environment interactions. Toxics. 2021 April 06; 9(4): 10.3390/toxics9040077. PMCID: PMC8067468.
  13. Cohen Hubal EA, Reif DM, Slover R, Mullikin A, Little JC. Children’s environmental health: A systems approach for anticipating impacts from chemicals. Int J Environ Res Public Health. 2020 November 11; 17(22): 10.3390/ijerph17228337. PMCID: PMC7696947.
  14. Gluge J, Scheringer M, Cousins IT, DeWitt JC, Goldenman G, Herzke D, Lohmann R, Ng CA, Trier X, Wang Z. An overview of the uses of per- and polyfluoroalkyl substances (PFAS). Environ Sci Process Impacts. 2020 December 01; 22(12): 2345-2373. PMCID: PMC7784712.
  15. Kwiatkowski, C.F. Andrews, D.Q. Birnbaum, L.S. Bruton, T.A. DeWitt, J.C. Knappe, D.R.U. Maffini, M.V. Miller, M.F. Pelch, K.E. Reade, A. Soehl, A. Trier, X. Venier, M. Wagner, C.C. Wang, Z. Blum, A. Scientific basis for managing PFAS as a chemical class. Environmental Science & Technology Letters. 2020 June 30,; 7(8): 532–543.
  16. Odenkirk MT, Zin PPK, Ash JR, Reif DM, Fourches D, Baker ES. Structural-based connectivity and omic phenotype evaluations (SCOPE): A cheminformatics toolbox for investigating lipidomic changes in complex systems. Analyst. 2020 November 09; 145(22): 7197-7209. PMCID: PMC7695036.
  17. Odenkirk MT, Stratton KG, Gritsenko MA, Bramer LM, Webb-Robertson BM, Bloodsworth KJ, Weitz KK, Lipton AK, Monroe ME, Ash JR, Fourches D, Taylor BD, Burnum-Johnson KE, Baker ES. Unveiling molecular signatures of preeclampsia and gestational diabetes mellitus with multi-omics and innovative cheminformatics visualization tools. Mol Omics. 2020 December 01; 16(6): 521-532. PMCID: PMC7736332.